Package index • vcfppR

All functions

vcfcomp(): Compare two VCF/BCF files reporting various statistics

vcfplot(): Make sensible and beautiful plots based on various objects in vcfppR

vcfpopgen(): count the heterozygous sites per sample in the VCF/BCF

vcfppR vcfppR-package: vcfppR: Rapid Manipulation of the Variant Call Format (VCF)

vcfreader: API for manipulating the VCF/BCF.

vcfsummary(): summarize the various variant types at both variant level and sample level.

vcftable(): read VCF/BCF contents into R data structure

vcfwriter: API for writing the VCF/BCF.